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[Biophysics seminar] Julija Zavadlav: “Neural network potentials trained top-down”

November 9 at 13:00 - 14:00

Molecular modeling has become a cornerstone of many disciplines, including soft matter physics. However, the quality of predictions critically depends on the employed model that defines particle interactions. A class of models with tremendous success in recent years are neural network (NN) potentials due to their flexibility and capacity of learning many-body interactions. Traditionally, these models are trained bottom-up on quantum mechanical data. Top-down approaches that learn NN potentials directly from experimental data have received less attention, typically facing numerical and computational challenges when backpropagating through molecular dynamics (MD) simulations. We recently developed the Differentiable Trajectory Reweighting (DiffTRe) method, which bypasses differentiation through the MD simulation for time-independent observables. Leveraging thermodynamic perturbation theory, we avoid exploding gradients and achieve around 2 orders of magnitude speed-up in gradient computation for top-down learning. The effectiveness of DiffTRe is showcased on atomistic and coarse-grained models using diverse experimental observables including thermodynamic, structural, and mechanical properties. Our approach opens the way to high fidelity molecular models, particularly when bottom-up data is unavailable or insufficiently accurate.
The meeting will take place online via Zoom:

Meeting ID: 833 0750 1179

Passcode: bio

Details

Date:
November 9
Time:
13:00 - 14:00

Venue

Zoom