[Biophysics seminar] Andraž Gnidovec: “Simulating the packing of spherical ellipses”
F1 tearoomPacking problems are abundant in nature and are thoroughly researched both experimentally and in numerical models. In particular, packings of anisotropic, elliptical particles emerge in models of liquid crystals, colloids, as well as granular and jammed matter. While most of … Read More
[Biophysics seminar] Boris Rogelj: “Molecular and cellular basis of neurodegeneration”
Seminarska soba fizike (106) Jozef Stefan Institute (Jamova 39), LjubljanaI will describe the basic molecular processes associated with disruption of homeostasis in a nerve cell and leading to neurodegeneration. We are mainly engaged in research into the causes of amyotrophic lateral sclerosis and frontotemporal dementia. We look at the … Read More
[Biophysics seminar] Julija Zavadlav: “Neural network potentials trained top-down”
ZoomMolecular modeling has become a cornerstone of many disciplines, including soft matter physics. However, the quality of predictions critically depends on the employed model that defines particle interactions. A class of models with tremendous success in recent years are neural … Read More
[Biophysics seminar] Fabio Staniscia: “Surfactant-induced apparent line tension”
ZoomLine tension is the tension generated at the three-phase contact line by the interaction between the phases, and is usually negligible at large sizes while becoming important at smaller scales. In this talk I will introduce the concept and show … Read More
[Biophysics seminar] Matej Kanduč: “Lipids’ dilemma: a monolayer or a bilayer?”
ZoomLipids are amphiphilic molecules and tend to self-assemble into various supramolecular formations. The most eminent among them is the lipid bilayer - also a continuous barrier around all cells. Some surfaces have the ability to unfold the bilayer and "coat" … Read More
[Biophysics seminar] Tanmoy Sarkar: “A minimal lattice model of lipid membranes with liquid-ordered domains”
ZoomBinary or ternary mixtures of lipids and cholesterol featuring liquid-ordered (Lo) domains serve as model systems for studying the formation of lipid rafts in complex biological membranes. In the talk, I will present a new lattice model of a binary mixture of saturated DPPC … Read More
[Biophysics seminar] Clement Zankoc: “Active Instability and Nonlinear Dynamics of Cell-Cell Junctions”
ZoomActive cell-junction remodeling is important for tissue morphogenesis, yet its underlying physics is not understood. We study a mechanical model that describes junctions as dynamic active force dipoles. Their instability can trigger cell intercalations by a critical collapse. Nonlinearities in … Read More
[Biophysics seminar] Toshikaze Chiba: “Deformation and rearrangement of membranes in adhering vesicles”
ZoomVesicle is a molecular assembly configuring lipid bilayer shell, and investigated as a model system of biological cell. Using both experimental observation and minimising the total energy, we study the morphology of lipid vesicle doublet and triplet. We demonstrate that … Read More
[Biophysics seminar] Marin Šako: “Soft matter under tension and cavitation”
ZoomThe meeting will take place online via Zoom: Meeting ID: 833 0750 1179 Passcode: bio
[Biophysics seminar] Domen Vaupotič: “Viral RNA as a randomly branching polymer”
ZoomThe meeting will take place online via Zoom: Meeting ID: 833 0750 1179 Passcode: bio